Organizational structure of the Kostrzyca FGB consists of sections. Units and independent offices work within the following sections:

The Director's Section - symbol D
Secretariat and Personnel - symbol DK
Ecological Education and Research Information Office - symbol DI

The Deputy in Chief's Section - symbol Z
Harvest Organization and Resources Creation Unit - symbol ZP
Research and Resources Protection Unit - symbol ZZ
Biopreparation Production Unit - symbol ZB
Research and Implementation Unit - symbol ZBW:
            Cryo-preservation Laboratory - symbol ZBK
            DNA Analysis Laboratory - symbol ZBA

The Main Accountant's Section - symbol F
Financial and Economical Unit - symbol FG
Maintenance and Control of IT Systems Office - symbol FA